John Lees' blog
About me Posts Tags Categories
John Lees' blog
Cancel
About mePostsTagsCategories

All Posts

2021

Screamadelica, Primal Scream 02-26
Porting a bioinformatics tool to the web using WebAssembly, React and javascript 02-06
Thoughts on 'Whole genome phylogenies reflect the distributions of recombination rates for many bacterial species' 01-26

2020

Things I have learnt about using R (as a python/C++ programmer) 06-08
Things I have learnt about porting algorithms to GPUs (using CUDA) 06-08
Bot or not? Anti-research/University accounts on twitter 01-08

2019

Some thoughts on bioinformatics software maintenance 09-16
Plots that went wrong 09-13
Paper summary – Joint sequencing of human and pathogen genomes reveals the genetics of pneumococcal meningitis 05-15
Readthedocs failing to build: module 'setuptools.build_meta' has no attribute '__legacy__' 04-26
Conservation of core genes in S. pneumoniae 04-17
Using unitigs for bacterial GWAS with pyseer 04-08
Paper summary – PopPUNK for bacterial epidemiology 01-25

2018

Creating a conda package with compilation and dependencies 10-15
conda build: libarchive: cannot open shared object file: No such file or directory 10-09
Linear scaling of covariances 09-14
Expression modules in S. pneumoniae 04-24

2017

Installing phyx without sudo 11-24
setup.py not found using pip install 11-20
Firth regression in python 11-08
  • 1
  • 2
  • 3
  • 4
 John Lees