Postdoc at NYU School of Medicine. Formerly at at Wellcome Trust Sanger Institute/Cambridge University.

I am currently studying genetic variation affecting transmissibility in cases of natural pneumococcal variation. I also work on bacterial GWAS, and have published software (SEER) to perform this analysis.

You can view my articles on Google Scholar or ORCID.

I am in the Microbiology department, supervised by Jeffrey Weiser.

See the links above for my blog, code and twitter.

Email: john at johnlees dot me